Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model
-
Updated
Nov 21, 2022 - C
Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model
Causal Mixture Model for GWAS summary statistics
vcfpp.h + htslib + Rcpp = fast VCF/BCF https://doi.org/10.1093/bioinformatics/btae049
Inference of the Distribution of Fitness effects of new mutations with Maximum Likelihood
Simulate site frequency spectra (SFS) under simple population genetic models
A population genetics simulator for two population with migration and different generation time.
Gillespie simulations of advantageous drivers & deleterious passengers in cancer
Closed - Moved to new repo
C code for computing exact expected branch length spectrum of a Lambda-coalescent, in particular Example 2.4 in Durrett and Schweinsberg (2005)
Simulate site frequency spectra (SFS) under simple population genetic models using pre-computed allele frequency tables
Add a description, image, and links to the population-genetics topic page so that developers can more easily learn about it.
To associate your repository with the population-genetics topic, visit your repo's landing page and select "manage topics."